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ACADM acyl-CoA dehydrogenase medium chain [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100218051, updated on 13-Aug-2024

Summary

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Gene symbol
ACADM
Gene description
acyl-CoA dehydrogenase medium chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See ACADM in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 8 NC_044220.2 (53045..67502, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 8 NC_045007.1 (71407..85601, complement)

Chromosome 8 - NC_044220.2Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 20, NatB catalytic subunit Neighboring gene Rab geranylgeranyltransferase subunit beta Neighboring gene small nucleolar RNA SNORD45 Neighboring gene uncharacterized LOC115496148 Neighboring gene solute carrier family 44 member 5 Neighboring gene LIM homeobox 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables medium-chain fatty acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in medium-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-4 to C-12 straight chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044220.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    53045..67502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002189492.5 → XP_002189528.3  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    H1A291
    Conserved Domains (1) summary
    cd01157
    Location:43 → 420
    MCAD; Medium chain acyl-CoA dehydrogenase

  2. XM_030278829.3 → XP_030134689.2  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    Conserved Domains (1) summary
    cl09933
    Location:43 → 337
    ACAD; Acyl-CoA dehydrogenase

RNA

  1. XR_003961543.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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