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LOC100217958 heparan sulfate glucosamine 3-O-sulfotransferase 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100217958, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100217958
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 1
See related
Ensembl:ENSTGUG00000020085
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
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Genomic context

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See LOC100217958 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 6 NC_044218.2 (20806416..20851929)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 6 NC_045005.1 (20050356..20104629)

Chromosome 6 - NC_044218.2Genomic Context describing neighboring genes Neighboring gene B cell linker Neighboring gene DNA nucleotidylexotransferase Neighboring gene uncharacterized LOC116808552 Neighboring gene uncharacterized LOC115495788 Neighboring gene homeobox protein vex1 Neighboring gene microRNA mir-202-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044218.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    20806416..20851929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032749158.2 → XP_032605049.2  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

  2. XM_030276166.3 → XP_030132026.3  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

  3. XM_030276164.3 → XP_030132024.3  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

  4. XM_041716980.1 → XP_041572914.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

  5. XM_030276163.3 → XP_030132023.3  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

  6. XM_002191936.6 → XP_002191972.3  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

  7. XM_030276167.3 → XP_030132027.3  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A674GG33
    Conserved Domains (1) summary
    cl21551
    Location:57 → 298
    Sulfotransfer_3; Sulfotransferase family

RNA

  1. XR_005980804.1 RNA Sequence

  2. XR_005980805.1 RNA Sequence

Nucleotide Protein
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