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TLCD2 TLC domain containing 2 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100217502, updated on 13-Aug-2024

Summary

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Gene symbol
TLCD2
Gene description
TLC domain containing 2
See related
Ensembl:ENSTGUG00000005710
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See TLCD2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 19 NC_044231.2 (4755355..4759651)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 19 NC_045017.1 (4675181..4679847)

Chromosome 19 - NC_044231.2Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase SETD1A Neighboring gene apoptosis-inducing factor 3-like Neighboring gene pre-mRNA processing factor 8 Neighboring gene Rab interacting lysosomal protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane lipid distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TLC domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044231.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    4755355..4759651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030288091.3 → XP_030143951.3  TLC domain-containing protein 2

    UniProtKB/TrEMBL
    H0Z5L9
    Conserved Domains (1) summary
    smart00724
    Location:37 → 230
    TLC; TRAM, LAG1 and CLN8 homology domains
Nucleotide Protein
Heading Accession and Version

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