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LOC100217000 Galactosyltransferase family protein [ Zea mays ]

Gene ID: 100217000, updated on 14-Dec-2023

Summary

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Gene symbol
LOC100217000
Gene description
Galactosyltransferase family protein
Locus tag
ZEAMMB73_Zm00001d018312
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G011626
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Genomic context

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See LOC100217000 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (220826503..220827848)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (218290366..218291711)

Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene alpha-aminoadipic semialdehyde synthase Neighboring gene uncharacterized LOC100274064 Neighboring gene uncharacterized LOC118472123 Neighboring gene ornithine carbamoyltransferase, chloroplastic-like Neighboring gene uncharacterized LOC109939327

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100217000

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001143377.1 → NP_001136849.1  uncharacterized protein LOC100217000

    See identical proteins and their annotated locations for NP_001136849.1

    Status: PREDICTED

    Source sequence(s)
    BT037750
    UniProtKB/TrEMBL
    A0A3L6EHI9, B4FKW2
    Conserved Domains (1) summary
    cl21608
    Location:125 → 245
    Galactosyl_T; Galactosyltransferase

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    220826503..220827848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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