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lyrm9 LYR motif containing 9 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100216103, updated on 17-Aug-2024

Summary

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Official Symbol
lyrm9provided by Xenbase
Official Full Name
LYR motif containing 9provided by Xenbase
Primary source
Xenbase:XB-GENE-5874439
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
c17orf108
Orthologs
human mouse all
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Genomic context

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See lyrm9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (47192258..47200981, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (42849101..42857907, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116408677 Neighboring gene nitric oxide synthase 2 Neighboring gene PRKR interacting protein 1 Neighboring gene nemo-like kinase Neighboring gene uncharacterized LOC105946523

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LYR motif-containing protein 9
Names
UPF0631 protein C17orf108 homolog
UPF0631 protein HSD24 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171687.1 → NP_001165158.1  LYR motif-containing protein 9

    Status: PROVISIONAL

    Source sequence(s)
    BC168045
    UniProtKB/Swiss-Prot
    B4F6X2
    UniProtKB/TrEMBL
    A0A8J1J178
    Conserved Domains (1) summary
    cd20269
    Location:13 → 73
    Complex1_LYR_LYRM9; LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 9 (LYRM9) and similar proteins

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    47192258..47200981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012956560.3 → XP_012812014.1  LYR motif-containing protein 9 isoform X1

    UniProtKB/Swiss-Prot
    B4F6X2
    UniProtKB/TrEMBL
    A0A8J1J178
    Conserved Domains (1) summary
    cd20269
    Location:13 → 73
    Complex1_LYR_LYRM9; LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 9 (LYRM9) and similar proteins

  2. XM_012956561.3 → XP_012812015.1  LYR motif-containing protein 9 isoform X1

    UniProtKB/Swiss-Prot
    B4F6X2
    UniProtKB/TrEMBL
    A0A8J1J178
    Conserved Domains (1) summary
    cd20269
    Location:13 → 73
    Complex1_LYR_LYRM9; LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 9 (LYRM9) and similar proteins

  3. XM_031895747.1 → XP_031751607.1  LYR motif-containing protein 9 isoform X1

    UniProtKB/Swiss-Prot
    B4F6X2
    UniProtKB/TrEMBL
    A0A8J1J178
    Conserved Domains (1) summary
    cd20269
    Location:13 → 73
    Complex1_LYR_LYRM9; LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 9 (LYRM9) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B4F6X2.1 GenPept UniProtKB/Swiss-Prot:B4F6X2

Gene LinkOut

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