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hywnt9/10a secreted signaling factor Wnt9/10a [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100215038, updated on 27-Jun-2024

Summary

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Gene symbol
hywnt9/10a
Gene description
secreted signaling factor Wnt9/10a
See related
EnsemblRapid:GeneID_100215038
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Genomic context

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See hywnt9/10a in Genome Data Viewer
Location:
chromosome: 06
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current HydraT2T_105 (GCF_037890685.1) 06 NC_088969.1 (10872759..10876093, complement)
RS_2024_06 current HydraT2T_AEP (GCF_038396675.1) 06 NC_088925.1 (11683259..11687264)
103 previous assembly Hydra_105_v3 (GCF_022113875.1) 8 NC_061163.1 (41311935..41315217)

Chromosome 06 - NC_088969.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136093916 Neighboring gene secreted signaling factor Wnt9/10b Neighboring gene serine/arginine-rich splicing factor 5 Neighboring gene uncharacterized LOC100203959

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Wnt-1; protein Wnt-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037890685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HydraT2T_105 Primary Assembly

Genomic

  1. NC_088969.1 Reference HydraT2T_105 Primary Assembly

    Range
    10872759..10876093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047282188.2 → XP_047138144.1  protein Wnt-1

    Related
    XP_047138144.1

Alternate HydraT2T_AEP

Genomic

  1. NC_088925.1 Alternate HydraT2T_AEP

    Range
    11683259..11687264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065799220.1 → XP_065655292.1  protein Wnt-4

Nucleotide Protein
Heading Accession and Version

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