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LOC100200804 histone-arginine methyltransferase METTL23 [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100200804, updated on 10-Oct-2024

Summary

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Gene symbol
LOC100200804
Gene description
histone-arginine methyltransferase METTL23
See related
EnsemblRapid:LOC100200804
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Genomic context

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See LOC100200804 in Genome Data Viewer
Location:
chromosome: 09
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current HydraT2T_105 (GCF_037890685.1) 09 NC_088972.1 (25904193..25918861, complement)
RS_2024_06 current HydraT2T_AEP (GCF_038396675.1) 09 NC_088928.1 (27683322..27705299, complement)
103 previous assembly Hydra_105_v3 (GCF_022113875.1) 5 NC_061160.1 (25341616..25356112, complement)

Chromosome 09 - NC_088972.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis-defective protein 39 homolog Neighboring gene uncharacterized LOC136095340 Neighboring gene DNA helicase MCM9 Neighboring gene uncharacterized LOC136095341 Neighboring gene uncharacterized LOC105846644

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-arginine methyltransferase METTL23
Names
methyltransferase-like protein 23
probable methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037890685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HydraT2T_105 Primary Assembly

Genomic

  1. NC_088972.1 Reference HydraT2T_105 Primary Assembly

    Range
    25904193..25918861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002168036.5 → XP_002168072.2  histone-arginine methyltransferase METTL23 isoform X1

    UniProtKB/TrEMBL
    A0A8B7D795, T2MAT2
    Related
    XP_002168072.2
    Conserved Domains (1) summary
    cl17173
    Location:38 → 170
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_065825761.1 → XP_065681833.1  histone-arginine methyltransferase METTL23 isoform X1

    UniProtKB/TrEMBL
    T2MAT2

Alternate HydraT2T_AEP

Genomic

  1. NC_088928.1 Alternate HydraT2T_AEP

    Range
    27683322..27705299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065805227.1 → XP_065661299.1  histone-arginine methyltransferase METTL23 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials