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hywnt9/10b secreted signaling factor Wnt9/10b [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100198339, updated on 27-Jun-2024

Summary

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Gene symbol
hywnt9/10b
Gene description
secreted signaling factor Wnt9/10b
See related
EnsemblRapid:GeneID_100198339
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Genomic context

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See hywnt9/10b in Genome Data Viewer
Location:
chromosome: 06
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current HydraT2T_105 (GCF_037890685.1) 06 NC_088969.1 (10846662..10848423, complement)
RS_2024_06 current HydraT2T_AEP (GCF_038396675.1) 06 NC_088925.1 (11629024..11630688, complement)
103 previous assembly Hydra_105_v3 (GCF_022113875.1) 8 NC_061163.1 (41339616..41341223)

Chromosome 06 - NC_088969.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136093697 Neighboring gene uncharacterized LOC136093916 Neighboring gene secreted signaling factor Wnt9/10a Neighboring gene serine/arginine-rich splicing factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Wnt-7b; protein wingless

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037890685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HydraT2T_105 Primary Assembly

Genomic

  1. NC_088969.1 Reference HydraT2T_105 Primary Assembly

    Range
    10846662..10848423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047282803.2 → XP_047138759.1  protein Wnt-7b isoform X1

    Related
    XP_047138759.1

  2. XM_002169299.4 → XP_002169335.2  protein Wnt-7b isoform X2

    See identical proteins and their annotated locations for XP_002169335.2

    UniProtKB/TrEMBL
    B9WZC1
    Related
    XP_002169335.2
    Conserved Domains (1) summary
    cd13113
    Location:47 → 334
    Wnt; Wnt domain found in the WNT signaling gene family, also called Wingless-type mouse mammary tumor virus (MMTV) integration site family

Alternate HydraT2T_AEP

Genomic

  1. NC_088925.1 Alternate HydraT2T_AEP

    Range
    11629024..11630688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065798311.1 → XP_065654383.1  protein wingless isoform X1

  2. XM_065798312.1 → XP_065654384.1  protein wingless isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials