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LOC100194185 uncharacterized LOC100194185 [ Zea mays ]

Gene ID: 100194185, updated on 14-Dec-2023

Summary

Gene symbol
LOC100194185
Gene description
uncharacterized LOC100194185
Locus tag
ZEAMMB73_Zm00001d022510
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
pco061836; GRMZM2G136803
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Genomic context

See LOC100194185 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (180827014..180835392)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (179105086..179113472, complement)

Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-beta Neighboring gene uncharacterized LOC100279622 Neighboring gene L10-interacting MYB domain-containing protein-like Neighboring gene uncharacterized LOC100280106

Genomic regions, transcripts, and products

General protein information

Preferred Names
4-alpha-glucanotransferase DPE2; uncharacterized protein LOC100194185
Names
pco061836(579)
NP_001346351.1
XP_020395913.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001359422.1NP_001346351.1  4-alpha-glucanotransferase DPE2

    Status: VALIDATED

    Source sequence(s)
    BT055804, CABHLF010000015
    UniProtKB/TrEMBL
    A0A1D6INP6, A0A1D6INP8
    Conserved Domains (1) summary
    PLN02950
    Location:4911
    PLN02950; 4-alpha-glucanotransferase

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    180827014..180835392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020540324.3XP_020395913.1  uncharacterized protein LOC100194185 isoform X1

    UniProtKB/TrEMBL
    A0A1D6INP6, A0A1D6INP8
    Conserved Domains (1) summary
    PLN02950
    Location:4911
    PLN02950; 4-alpha-glucanotransferase

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001139232.1: Suppressed sequence

    Description
    NM_001139232.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.