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LOC100192793 uncharacterized LOC100192793 [ Zea mays ]

Gene ID: 100192793, updated on 23-Dec-2022

Summary

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Gene symbol
LOC100192793
Gene description
uncharacterized LOC100192793
Locus tag
ZEAMMB73_Zm00001d022059
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G131262
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Genomic context

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See LOC100192793 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (172756103..172758855)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (169184826..169187483)

Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100275855 Neighboring gene uncharacterized LOC100192696 Neighboring gene uncharacterized LOC100135421 Neighboring gene uncharacterized LOC100277236

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
  2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  3. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
PLASMODESMATA CALLOSE-BINDING PROTEIN 3; uncharacterized protein LOC100192793
Names
PLASMODESMATA CALLOSE-BINDING PROTEIN 2
glucan endo-1,3-beta-glucosidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001154928.2 → NP_001148400.2  PLASMODESMATA CALLOSE-BINDING PROTEIN 3 precursor

    Status: VALIDATED

    Source sequence(s)
    BT038291, EU959225
    UniProtKB/TrEMBL
    B4FMF3
    Conserved Domains (1) summary
    smart00768
    Location:20 → 104
    X8; Possibly involved in carbohydrate binding

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    172756103..172758855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035960367.1 → XP_035816260.1  uncharacterized protein LOC100192793 isoform X1

    UniProtKB/TrEMBL
    C0PNX0
    Conserved Domains (1) summary
    smart00768
    Location:20 → 104
    X8; Possibly involved in carbohydrate binding

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001137986.1: Suppressed sequence

    Description
    NM_001137986.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version

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