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LOC100192389 anaphase promoting complex subunit 13 pseudogene [ Homo sapiens (human) ]

Gene ID: 100192389, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100192389
Gene description
anaphase promoting complex subunit 13 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100192389 in Genome Data Viewer
Location:
1p12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (117699429..117700259, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (117708639..117709469, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (118242051..118242881, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1243 Neighboring gene VDAC2 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1583 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1585 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1586 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1587 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1588 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:118241179-118241354 Neighboring gene NANOG hESC enhancer GRCh37_chr1:118241403-118241982 Neighboring gene proline rich nuclear receptor coactivator 2 pseudogene 1 Neighboring gene uncharacterized LOC105378929

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008942.1 

    Range
    101..931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    117699429..117700259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    117708639..117709469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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