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TUSC3 tumor suppressor candidate 3 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100190471, updated on 13-Aug-2024

Summary

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Gene symbol
TUSC3
Gene description
tumor suppressor candidate 3
See related
Ensembl:ENSTGUG00000007309
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See TUSC3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 4 NC_044215.2 (28480115..28592178)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 4 NC_045002.1 (28544275..28657327)

Chromosome 4 - NC_044215.2Genomic Context describing neighboring genes Neighboring gene sarcoglycan zeta Neighboring gene microRNA mir-383 Neighboring gene uncharacterized LOC121469957 Neighboring gene uncharacterized LOC116808228 Neighboring gene fibroblast growth factor 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes. Wada K, et al. Proc Natl Acad Sci U S A, 2006 Oct 10. PMID 17018643, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor suppressor candidate 3
Names
putative tumor suppressor candidate 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001245134.1 → NP_001232063.1  tumor suppressor candidate 3 precursor

    See identical proteins and their annotated locations for NP_001232063.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ216319
    UniProtKB/TrEMBL
    B5G2V3, B5G2V4
    Related
    ENSTGUP00000030347.1, ENSTGUT00000026262.1
    Conserved Domains (1) summary
    pfam04756
    Location:50 → 338
    OST3_OST6; OST3 / OST6 family, transporter family

RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044215.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    28480115..28592178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012573477.4 → XP_012428931.4  tumor suppressor candidate 3 isoform X1

    UniProtKB/TrEMBL
    A0A674GX16
    Conserved Domains (1) summary
    cd02947
    Location:82 → 179
    TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...
Nucleotide Protein
Heading Accession and Version

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