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mreg.S melanoregulin S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100189560, updated on 4-Nov-2024

Summary

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Official Symbol
mreg.S
Official Full Name
melanoregulin S homeolog
Primary source
Xenbase:XB-GENE-6078827
Locus tag
XELAEV_18047293mg
See related
AllianceGenome:Xenbase:XB-GENE-6078827
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to act upstream of or within melanocyte differentiation and melanosome transport. Predicted to be located in melanosome. Orthologous to human MREG (melanoregulin). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See mreg.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (73911936..73923807)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (67268654..67280524)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene uncharacterized methyltransferase-like C25B8.10 Neighboring gene uncharacterized LOC100217319 Neighboring gene fibronectin 1 S homeolog Neighboring gene 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within melanosome transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in melanosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
melanoregulin S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135063.1 → NP_001128535.1  melanoregulin S homeolog

    See identical proteins and their annotated locations for NP_001128535.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080057
    UniProtKB/TrEMBL
    Q68EZ1
    Conserved Domains (1) summary
    pfam15812
    Location:41 → 113
    MREG; Melanoregulin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    73911936..73923807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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