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TRK-TTT15-1 tRNA-Lys (anticodon TTT) 15-1 [ Homo sapiens (human) ]

Gene ID: 100189504, updated on 17-Sep-2024

Summary

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Official Symbol
TRK-TTT15-1provided by HGNC
Official Full Name
tRNA-Lys (anticodon TTT) 15-1provided by HGNC
Primary source
HGNC:HGNC:35079
See related
AllianceGenome:HGNC:35079
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAK39P
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Genomic context

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See TRK-TTT15-1 in Genome Data Viewer
Location:
2q36.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (223321597..223321669, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (223804630..223804702, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (224186315..224186387, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373906 Neighboring gene Sharpr-MPRA regulatory region 6911 Neighboring gene RNA, 7SL, cytoplasmic 807, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:224195595-224196094 Neighboring gene HIG1 hypoxia inducible domain family member 1A pseudogene 4 Neighboring gene uncharacterized LOC105373907

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Lys-TTT-15-1
  • transfer RNA lysine 39 (anticodon UUU) pseudogene
  • transfer RNA-Lys (TTT) 15-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008562.1 

    Range
    101..173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    223321597..223321669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    223804630..223804702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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