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TRE-CTC9-1 tRNA-Glu (CTC) 9-1 [ Homo sapiens (human) ]

Gene ID: 100189494, updated on 17-Sep-2024

Summary

Official Symbol
TRE-CTC9-1provided by HGNC
Official Full Name
tRNA-Glu (CTC) 9-1provided by HGNC
Primary source
HGNC:HGNC:35069
See related
AllianceGenome:HGNC:35069
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAE38P
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Genomic context

See TRE-CTC9-1 in Genome Data Viewer
Location:
2q23.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (150362763..150362835)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (150813137..150813209)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (151219277..151219349)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373682 Neighboring gene long intergenic non-protein coding RNA 1818 Neighboring gene long intergenic non-protein coding RNA 1817 Neighboring gene VISTA enhancer hs1386 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:151199972-151201171 Neighboring gene NANOG hESC enhancer GRCh37_chr2:151211977-151212479 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:151267272-151268161 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:151281462-151281962 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:151281963-151282463 Neighboring gene uncharacterized LOC105373685 Neighboring gene Sharpr-MPRA regulatory region 9612 Neighboring gene Rho family GTPase 3

Genomic regions, transcripts, and products

General gene information

Other Names

  • transfer RNA glutamic acid 38 (anticodon CUC) pseudogene
  • transfer RNA-Glu (CTC) 9-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008552.1 

    Range
    101..173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    150362763..150362835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    150813137..150813209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)