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TRY-GTA5-1 tRNA-Tyr (anticodon GTA) 5-1 [ Homo sapiens (human) ]

Gene ID: 100189437, updated on 10-Oct-2023

Summary

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Official Symbol
TRY-GTA5-1provided by HGNC
Official Full Name
tRNA-Tyr (anticodon GTA) 5-1provided by HGNC
Primary source
HGNC:HGNC:35007
See related
AllianceGenome:HGNC:35007
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAY15; TRY-GTA5-4
Expression
Restricted expression toward testis (RPKM 11.4) See more
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Genomic context

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Location:
8q13.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (66113367..66113459)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (66539062..66539154)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (67025602..67025694)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986950 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27466 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27467 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27468 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27469 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:66862529-66863728 Neighboring gene uncharacterized LOC105375883 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27470 Neighboring gene Sharpr-MPRA regulatory region 3041 Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 beta Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19250 Neighboring gene Sharpr-MPRA regulatory region 492 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27471 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27472 Neighboring gene H3K27ac hESC enhancers GRCh37_chr8:67025273-67025924 and GRCh37_chr8:67025925-67026577 Neighboring gene tRNA-Tyr (anticodon GTA) 5-2 Neighboring gene tRNA-Ala (anticodon AGC) 8-2 Neighboring gene tripartite motif containing 55

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Tyr-GTA-5-1
  • transfer RNA tyrosine 15 (anticodon GUA)
  • transfer RNA-Tyr (GTA) 5-1
  • transfer RNA-Tyr (GTA) 5-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    66113367..66113459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    66539062..66539154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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