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TRI-GAT1-3 tRNA-Ile (anticodon GAT) 1-3 [ Homo sapiens (human) ]

Gene ID: 100189427, updated on 10-Oct-2023

Summary

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Official Symbol
TRI-GAT1-3provided by HGNC
Official Full Name
tRNA-Ile (anticodon GAT) 1-3provided by HGNC
Primary source
HGNC:HGNC:34996
See related
AllianceGenome:HGNC:34996
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAI26
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Genomic context

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Location:
Xp22.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (3915230..3915303, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (3457769..3457842, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (3833271..3833344, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene zinc finger protein 839 pseudogene Neighboring gene tRNA-Ile (anticodon GAT) 1-1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20648 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:3761495-3761995 Neighboring gene zinc finger protein 839 pseudogene Neighboring gene tRNA-Ile (anticodon GAT) 1-2 Neighboring gene zinc finger protein 839 pseudogene Neighboring gene family with sequence similarity 239 member C Neighboring gene RPL24 pseudogene 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Ile (GAT) 1-3
  • transfer RNA isoleucine 26 (anticodon GAU)
  • transfer RNA-Ile (GAT) 1-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    3915230..3915303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    3457769..3457842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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