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TRT-TGT4-1 tRNA-Thr (anticodon TGT) 4-1 [ Homo sapiens (human) ]

Gene ID: 100189419, updated on 10-Oct-2023

Summary

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Official Symbol
TRT-TGT4-1provided by HGNC
Official Full Name
tRNA-Thr (anticodon TGT) 4-1provided by HGNC
Primary source
HGNC:HGNC:34988
See related
AllianceGenome:HGNC:34988
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAT20
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Genomic context

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Location:
14q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (20631160..20631232, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (14828279..14828351, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (21099319..21099391, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ribosomal protein S26 pseudogene 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8082 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr14:21093326-21094068 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:21094069-21094809 Neighboring gene tRNA-Leu (anticodon TAG) 2-1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8083 Neighboring gene Sharpr-MPRA regulatory region 11977 Neighboring gene tRNA-Pro (anticodon TGG) 1-1 Neighboring gene olfactory receptor family 6 subfamily S member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Thr-TGT-4-1
  • transfer RNA threonine 20 (anticodon UGU)
  • transfer RNA-Thr (TGT) 4-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    20631160..20631232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    14828279..14828351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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