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TRE-TTC1-1 tRNA-Glu (anticodon TTC) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189418, updated on 10-Oct-2023

Summary

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Official Symbol
TRE-TTC1-1provided by HGNC
Official Full Name
tRNA-Glu (anticodon TTC) 1-1provided by HGNC
Primary source
HGNC:HGNC:34987
See related
AllianceGenome:HGNC:34987
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAE26; TRE-TTC1-2
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Genomic context

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See TRE-TTC1-1 in Genome Data Viewer
Location:
2q21.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (130337128..130337199, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (130771052..130771123, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (131094701..131094772, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L19 pseudogene 4 Neighboring gene tektin 4 pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:131089968-131090518 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16525 Neighboring gene coiled-coil domain containing 115 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16526 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16527 Neighboring gene IMP U3 small nucleolar ribonucleoprotein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • tRNA-Glu (TTC) 1-1
  • tRNA-Glu-TTC-1-2
  • transfer RNA glutamic acid 26 (anticodon UUC)
  • transfer RNA-Glu (TTC) 1-1
  • transfer RNA-Glu (TTC) 1-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    130337128..130337199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    130771052..130771123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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