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TRV-CAC1-1 tRNA-Val (anticodon CAC) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189373, updated on 10-Oct-2023

Summary

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Official Symbol
TRV-CAC1-1provided by HGNC
Official Full Name
tRNA-Val (anticodon CAC) 1-1provided by HGNC
Primary source
HGNC:HGNC:34941
See related
AllianceGenome:HGNC:34941
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAV29
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Genomic context

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See TRV-CAC1-1 in Genome Data Viewer
Location:
1q23.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (161399700..161399772, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (160537142..160537214, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (161369490..161369562, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ribonucleotide reductase M2 polypeptide pseudogene 2 Neighboring gene uncharacterized LOC124904443 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1989 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1477 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1990 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:161369123-161369722 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:161369723-161370322 Neighboring gene RNA, U6 small nuclear 481, pseudogene Neighboring gene ribosomal protein S2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Val-CAC-1-1
  • transfer RNA valine 29 (anticodon CAC)
  • transfer RNA-Val (CAC) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    161399700..161399772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    160537142..160537214 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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