U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRT-CGT3-1 tRNA-Thr (anticodon CGT) 3-1 [ Homo sapiens (human) ]

Gene ID: 100189360, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
TRT-CGT3-1provided by HGNC
Official Full Name
tRNA-Thr (anticodon CGT) 3-1provided by HGNC
Primary source
HGNC:HGNC:34928
See related
AllianceGenome:HGNC:34928
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAT17
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRT-CGT3-1 in Genome Data Viewer
Location:
6p22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (28648207..28648280, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (28519540..28519613, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (28615984..28616057, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Ala (anticodon TGC) 9-1 Neighboring gene uncharacterized LOC105374996 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:28607773-28608273 Neighboring gene tRNA-Ala (anticodon TGC) 2-1 Neighboring gene long intergenic non-protein coding RNA 533 Neighboring gene tRNA-Ala (anticodon AGC) 4-1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • tRNA-Thr-CGT-3-1
  • transfer RNA threonine 17 (anticodon CGU)
  • transfer RNA-Thr (CGT) 3-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    28648207..28648280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    138045..138118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    28519540..28519613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials