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TRS-TGA1-1 tRNA-Ser (anticodon TGA) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189279, updated on 10-Oct-2023

Summary

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Official Symbol
TRS-TGA1-1provided by HGNC
Official Full Name
tRNA-Ser (anticodon TGA) 1-1provided by HGNC
Primary source
HGNC:HGNC:34845
See related
AllianceGenome:HGNC:34845
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAS21
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Genomic context

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See TRS-TGA1-1 in Genome Data Viewer
Location:
10q21.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (67764503..67764584)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (68632954..68633035)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (69524261..69524342)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene catenin alpha 3 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_15807 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_15830 Neighboring gene microRNA 7151 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_15959 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_15994 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3449 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3450 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_16073 Neighboring gene Sharpr-MPRA regulatory region 10071 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3451 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3452 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3453 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3454 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3455 Neighboring gene aldo-keto reductase family 1 member B10 pseudogene 1 Neighboring gene RNA, U6 small nuclear 1250, pseudogene Neighboring gene ribosomal protein L21 pseudogene 92 Neighboring gene DnaJ heat shock protein family (Hsp40) member C12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Ser-TGA-1-1
  • transfer RNA serine 21 (anticodon UGA)
  • transfer RNA-Ser (TGA) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    67764503..67764584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    68632954..68633035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases