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TRI-AAT1-1 tRNA-Ile (anticodon AAT) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189249, updated on 10-Oct-2023

Summary

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Official Symbol
TRI-AAT1-1provided by HGNC
Official Full Name
tRNA-Ile (anticodon AAT) 1-1provided by HGNC
Primary source
HGNC:HGNC:34812
See related
AllianceGenome:HGNC:34812
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAI12
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Genomic context

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Location:
6p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (57800211..57800284)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (57638975..57639048)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (58149254..58149327)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene DNA primase subunit 2 Neighboring gene long intergenic non-protein coding RNA 3001 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17305 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:57211753-57212253 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:57288076-57288610 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:57288611-57289144 Neighboring gene microRNA 548u Neighboring gene ReSE screen-validated silencer GRCh37_chr6:57298773-57298947 Neighboring gene uncharacterized LOC105375103 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:58146291-58147490 Neighboring gene uncharacterized LOC105375102 Neighboring gene uncharacterized LOC105375101 Neighboring gene tRNA-Ala (anticodon AGC) 24-1 Neighboring gene transfer RNA isoleucine (anticodon AAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Ile (AAT) 1-1
  • transfer RNA isoleucine 12 (anticodon AAU)
  • transfer RNA-Ile (AAT) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    57800211..57800284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    57638975..57639048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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