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TRD-GTC2-8 tRNA-Asp (anticodon GTC) 2-8 [ Homo sapiens (human) ]

Gene ID: 100189239, updated on 10-Oct-2023

Summary

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Official Symbol
TRD-GTC2-8provided by HGNC
Official Full Name
tRNA-Asp (anticodon GTC) 2-8provided by HGNC
Primary source
HGNC:HGNC:34802
See related
AllianceGenome:HGNC:34802
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAD12; TRD-GTC2-6
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Genomic context

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Location:
12q23.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (96036021..96036092)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (96010018..96010089)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (96429799..96429870)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_31139 Neighboring gene histidine ammonia-lyase Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 12:96379806 Neighboring gene uncharacterized LOC102723340 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_31163 Neighboring gene Sharpr-MPRA regulatory region 10760 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6820 Neighboring gene leukotriene A4 hydrolase Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_31173 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_31174 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_31179 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_31194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6821 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4740 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6822 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6823 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6824 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:96440866-96442065 Neighboring gene uncharacterized LOC124902990 Neighboring gene YPEL5 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Asp (GTC) 2-8
  • tRNA-Asp-GTC-2-6
  • transfer RNA aspartic acid 12 (anticodon GUC)
  • transfer RNA-Asp (GTC) 2-6
  • transfer RNA-Asp (GTC) 2-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    96036021..96036092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    96010018..96010089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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