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TRW-CCA2-1 tRNA-Trp (anticodon CCA) 2-1 [ Homo sapiens (human) ]

Gene ID: 100189203, updated on 10-Oct-2023

Summary

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Official Symbol
TRW-CCA2-1provided by HGNC
Official Full Name
tRNA-Trp (anticodon CCA) 2-1provided by HGNC
Primary source
HGNC:HGNC:34766
See related
AllianceGenome:HGNC:34766
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAW7
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Genomic context

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Location:
17p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (19508181..19508252)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (19456315..19456386)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (19411494..19411565)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371574 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19356211-19356712 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19356713-19357212 Neighboring gene ribosomal protein S2 pseudogene 46 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19361301-19361846 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19361847-19362393 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:19362394-19362939 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:19363487-19364033 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19364034-19364580 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19366221-19366766 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19374315-19374824 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19378419-19379256 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:19384743-19385658 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:19385659-19386572 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:19395941-19396458 Neighboring gene ribosomal protein L17 pseudogene 43 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:19408793-19409392 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8293 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8294 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8295 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8296 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19413581-19414202 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19422139-19422858 Neighboring gene solute carrier family 47 member 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19455640-19456140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19456141-19456641 Neighboring gene uncharacterized LOC105371578 Neighboring gene small nucleolar RNA, H/ACA box 59B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Trp-CCA-2-1
  • transfer RNA tryptophan 7 (anticodon CCA)
  • transfer RNA-Trp (CCA) 2-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    19508181..19508252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    19456315..19456386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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