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TRK-CTT9-1 tRNA-Lys (anticodon CTT) 9-1 [ Homo sapiens (human) ]

Gene ID: 100189180, updated on 10-Oct-2023

Summary

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Official Symbol
TRK-CTT9-1provided by HGNC
Official Full Name
tRNA-Lys (anticodon CTT) 9-1provided by HGNC
Primary source
HGNC:HGNC:34742
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAK18
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Genomic context

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See TRK-CTT9-1 in Genome Data Viewer
Location:
5p14.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (26198430..26198502, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (26303104..26303176, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901176 Neighboring gene NANOG hESC enhancer GRCh37_chr5:26009819-26010320 Neighboring gene RNA, U4 small nuclear 43, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr5:26240218-26240769 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:26417353-26417852 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:26476479-26477016 Neighboring gene MPRA-validated peak5190 silencer Neighboring gene cyclin B3 pseudogene 1 Neighboring gene uncharacterized LOC124901159

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General gene information

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Other Names

  • tRNA-Lys (CTT) 9-1
  • transfer RNA lysine 18 (anticodon CUU)
  • transfer RNA-Lys (CTT) 9-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    26198430..26198502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    26303104..26303176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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