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TRV-AAC4-1 tRNA-Val (anticodon AAC) 4-1 [ Homo sapiens (human) ]

Gene ID: 100189161, updated on 10-Oct-2023

Summary

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Official Symbol
TRV-AAC4-1provided by HGNC
Official Full Name
tRNA-Val (anticodon AAC) 4-1provided by HGNC
Primary source
HGNC:HGNC:34723
See related
MIM:615308; AllianceGenome:HGNC:34723
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAV17
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Genomic context

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Location:
6p22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (27681106..27681178, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (27550760..27550832, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (27648885..27648957, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Arg (anticodon ACG) 2-4 Neighboring gene tRNA-Ser (anticodon CGA) 3-1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:27646365-27646866 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17035 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17036 Neighboring gene tRNA-Thr (anticodon AGT) 2-2 Neighboring gene CRISPRi-validated cis-regulatory element chr6.1284 Neighboring gene tRNA-Ile (anticodon AAT) 2-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identity determinants of human tRNA(Ser): sequence elements necessary for serylation and maturation of a tRNA with a long extra arm. Achsel T, et al. EMBO J, 1993 Aug. PMID 8344269, Free PMC Article
  2. The first human genes for tRNA(ArgICG), tRNA(GlyUCC), and tRNA(ThrIGU) and more tRNA(Val) pseudogenes: expression and pre-tRNA maturation in HeLa cell-free extracts. Kaçar Y, et al. DNA Cell Biol, 1992 Dec. PMID 1457046
  3. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Val-AAC-4-1
  • transfer RNA valine 17 (anticodon AAC)
  • transfer RNA-Val (AAC) 4-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    27681106..27681178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    27550760..27550832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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