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TRV-CAC8-1 tRNA-Val (CAC) 8-1 [ Homo sapiens (human) ]

Gene ID: 100189142, updated on 17-Sep-2024

Summary

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Official Symbol
TRV-CAC8-1provided by HGNC
Official Full Name
tRNA-Val (CAC) 8-1provided by HGNC
Primary source
HGNC:HGNC:34704
See related
AllianceGenome:HGNC:34704
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAV16
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Genomic context

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See TRV-CAC8-1 in Genome Data Viewer
Location:
1q21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (143800041..143800111, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (142872138..142872208, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (149294666..149294736, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:149285989-149286613 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:149286614-149287237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149287238-149287862 Neighboring gene RNA, U1 small nuclear 143, pseudogene Neighboring gene tRNA-Phe (anticodon GAA) 9-1 Neighboring gene long intergenic non-protein coding RNA 2591 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149290176-149290676 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149290677-149291177 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1607 Neighboring gene tRNA-Val (anticodon CAC) 4-1 Neighboring gene PDE4DIP pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149332654-149333586

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • transfer RNA valine 16 (anticodon CAC)
  • transfer RNA-Val (CAC) 8-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    143800041..143800111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    142872138..142872208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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