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LOC100187449 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100187449, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100187449
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A
See related
Ensembl:ENSCING00000002685
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100187449 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 10 NC_020175.2 (230650..237600)

Chromosome 10 - NC_020175.2Genomic Context describing neighboring genes Neighboring gene phosphoinositide 3-kinase regulatory subunit 4 Neighboring gene TATA-box-binding protein Neighboring gene uncharacterized LOC113474617 Neighboring gene uncharacterized LOC100179510 Neighboring gene papilin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020175.2 Chromosome 10 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A
Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020175.2 Reference KH Primary Assembly

    Range
    230650..237600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002127104.4 → XP_002127140.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A1W2WGA8, F6XPI1
    Related
    ENSCINP00000005475
    Conserved Domains (1) summary
    pfam04666
    Location:95 → 352
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_026836388.1 → XP_026692189.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X2

    Conserved Domains (1) summary
    pfam04666
    Location:95 → 336
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials