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LOC100184300 protein mago nashi homolog [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100184300, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100184300
Gene description
protein mago nashi homolog
See related
Ensembl:ENSCING00000002708
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100184300 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) Unplaced Scaffold NW_004190418.1 (78010..79083)

NW_004190418.1Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene protein Hook homolog 3 Neighboring gene crooked neck-like protein 1 Neighboring gene metal transporter CNNM4 Neighboring gene histamine H2 receptor Neighboring gene zinc finger protein 317-like Neighboring gene COMM domain-containing protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004190418 Unplaced Scaffold Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of exon-exon junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein mago nashi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NW_004190418.1 Reference KH Primary Assembly

    Range
    78010..79083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002125780.4 → XP_002125816.1  protein mago nashi homolog

    UniProtKB/TrEMBL
    F6UE24
    Related
    ENSCINP00000005510
    Conserved Domains (1) summary
    cd11295
    Location:4 → 146
    Mago_nashi; Mago nashi proteins, integral members of the exon junction complex
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials