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LOC100181183 ceramide glucosyltransferase [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100181183, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100181183
Gene description
ceramide glucosyltransferase
See related
Ensembl:ENSCING00000008365
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100181183 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 8 NC_020173.2 (194612..200380, complement)

Chromosome 8 - NC_020173.2Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase 21 kDa proteolipid subunit Neighboring gene solute carrier family 12 member 2 Neighboring gene 60S ribosomal protein L38 Neighboring gene protein lyl-1 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020173.2 Chromosome 8 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020173.2 Reference KH Primary Assembly

    Range
    194612..200380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018813056.2 → XP_018668601.2  ceramide glucosyltransferase

    UniProtKB/TrEMBL
    F7A1T4
    Conserved Domains (2) summary
    TIGR03472
    Location:6 → 398
    HpnI; hopanoid biosynthesis associated glycosyl transferase protein HpnI
    cd02520
    Location:58 → 287
    Glucosylceramide_synthase; Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis
Nucleotide Protein
Heading Accession and Version

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