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B4GALT3 beta-1,4-galactosyltransferase 3 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100174763, updated on 26-Mar-2024

Summary

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Gene symbol
B4GALT3
Gene description
beta-1,4-galactosyltransferase 3
Locus tag
CR201_G0019395
See related
Ensembl:ENSPPYG00000000607
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See B4GALT3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (89175664..89181831)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (89175642..89181809)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene Fc epsilon receptor Ig Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene protoporphyrinogen oxidase Neighboring gene ubiquitin specific peptidase 21 Neighboring gene ubiquitin-fold modifier conjugating enzyme 1 Neighboring gene small nucleolar RNA ACA64

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp459J2220

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3
Names
N-acetyllactosamine synthase
UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 3
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 3
b4Gal-T3
beta-1,4-GalTase 3
beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase
beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
beta4Gal-T3
nal synthase
neolactotriaosylceramide beta-1,4-galactosyltransferase
NP_001127681.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134209.1 → NP_001127681.1  beta-1,4-galactosyltransferase 3

    See identical proteins and their annotated locations for NP_001127681.1

    Status: PROVISIONAL

    Source sequence(s)
    CR925982
    UniProtKB/Swiss-Prot
    Q5NVN3
    UniProtKB/TrEMBL
    A0A2J8VHW0, H2N517
    Related
    ENSPPYP00000000709.2, ENSPPYT00000000736.2
    Conserved Domains (1) summary
    cd00899
    Location:122 → 341
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    89175664..89181831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5NVN3.1 GenPept UniProtKB/Swiss-Prot:Q5NVN3

Gene LinkOut

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