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FYTTD1 forty-two-three domain containing 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173952, updated on 10-Oct-2024

Summary

Gene symbol
FYTTD1
Gene description
forty-two-three domain containing 1
Locus tag
CR201_G0054174
See related
Ensembl:ENSPPYG00000014456
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See FYTTD1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (208864142..208902870)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (196679049..196717819)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene mucin-1-like Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 2-like Neighboring gene rubicon autophagy regulator Neighboring gene leucine rich repeats and calponin homology domain containing 3 Neighboring gene uncharacterized LOC129058314 Neighboring gene U6 spliceosomal RNA Neighboring gene IQ motif containing G

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • DKFZp459C243

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001133462.1NP_001126934.1  UAP56-interacting factor

    See identical proteins and their annotated locations for NP_001126934.1

    Status: PROVISIONAL

    Source sequence(s)
    CR861216
    Conserved Domains (1) summary
    pfam07078
    Location:1259
    FYTT; Forty-two-three protein

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    208864142..208902870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063721602.1XP_063577672.1  UAP56-interacting factor isoform X1

    UniProtKB/TrEMBL
    A0A2J8R4A4, A0A663D6I2, H2PCH5
  2. XM_054550372.2XP_054406347.2  UAP56-interacting factor isoform X2