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GPAT4 glycerol-3-phosphate acyltransferase 4 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173520, updated on 10-Oct-2024

Summary

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Gene symbol
GPAT4
Gene description
glycerol-3-phosphate acyltransferase 4
Locus tag
CR201_G0033313
See related
Ensembl:ENSPPYG00000018544
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
1-AGPAT6; 1-AGPAT 6
Orthologs
human mouse all
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Genomic context

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See GPAT4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 7 NC_071992.2 (43635868..43679429)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 8 NC_071993.1 (44930355..44973916)

Chromosome 7 - NC_071992.2Genomic Context describing neighboring genes Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene uncharacterized LOC103891312 Neighboring gene GINS complex subunit 4 Neighboring gene NK6 homeobox 3 Neighboring gene ankyrin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp469O1716

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate acyltransferase 6
Names
1-AGP acyltransferase 6
1-acyl-sn-glycerol-3-phosphate acyltransferase zeta
1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)
LPAAT-zeta
acyl-CoA:glycerol-3-phosphate acyltransferase 4
lysophosphatidic acid acyltransferase zeta
NP_001126531.1
XP_024106375.1
XP_054416936.1
XP_054416937.1
XP_054416938.1
XP_063582391.1
XP_063582392.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001133059.1 → NP_001126531.1  glycerol-3-phosphate acyltransferase 6

    See identical proteins and their annotated locations for NP_001126531.1

    Status: PROVISIONAL

    Source sequence(s)
    CR860492
    UniProtKB/TrEMBL
    A0A8I5TDE6
    Related
    ENSPPYP00000020792.3, ENSPPYT00000021625.3
    Conserved Domains (1) summary
    cd07991
    Location:227 → 436
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071992.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    43635868..43679429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024250607.2 → XP_024106375.1  glycerol-3-phosphate acyltransferase 6 isoform X1

    UniProtKB/Swiss-Prot
    Q5R6J7
    UniProtKB/TrEMBL
    A0A2J8TNT3, A0A8I5TDE6
    Related
    ENSPPYP00000036569.1
    Conserved Domains (1) summary
    cd07991
    Location:218 → 427
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

  2. XM_063726322.1 → XP_063582392.1  glycerol-3-phosphate acyltransferase 6 isoform X1

    UniProtKB/Swiss-Prot
    Q5R6J7
    UniProtKB/TrEMBL
    A0A2J8TNT3

  3. XM_063726321.1 → XP_063582391.1  glycerol-3-phosphate acyltransferase 6 isoform X1

    UniProtKB/Swiss-Prot
    Q5R6J7
    UniProtKB/TrEMBL
    A0A2J8TNT3

  4. XM_054560963.2 → XP_054416938.1  glycerol-3-phosphate acyltransferase 6 isoform X1

    UniProtKB/Swiss-Prot
    Q5R6J7
    UniProtKB/TrEMBL
    A0A2J8TNT3

  5. XM_054560961.2 → XP_054416936.1  glycerol-3-phosphate acyltransferase 6 isoform X1

    UniProtKB/Swiss-Prot
    Q5R6J7
    UniProtKB/TrEMBL
    A0A2J8TNT3

  6. XM_054560962.1 → XP_054416937.1  glycerol-3-phosphate acyltransferase 6 isoform X1

    UniProtKB/Swiss-Prot
    Q5R6J7
    UniProtKB/TrEMBL
    A0A2J8TNT3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5R6J7.2 GenPept UniProtKB/Swiss-Prot:Q5R6J7

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