INTS11 integrator complex subunit 11 [Pongo abelii (Sumatran orangutan)] - Gene

Summary

Gene symbol: INTS11
Gene description: integrator complex subunit 11
Locus tag: CR201_G0053271
See related: Ensembl:ENSPPYG00000002013
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Pongo abelii
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as: CPSF3L; DKFZP459J1110
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2)	1	NC_071985.2 (232794392..232807882)
RS_2023_04	previous assembly	NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1)	1	NC_071985.1 (231936705..231950194)

Chromosome 1 - NC_071985.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA endonuclease activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in snRNA processing	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: integrator complex subunit 11

Names: CPSF3-like protein; cleavage and polyadenylation specific factor 3-like; cleavage and polyadenylation-specific factor 3-like protein; int11

XP_024110524.1

EC 3.1.27.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001131288.2 → NP_001124760.2 integrator complex subunit 11

Status: VALIDATED

Source sequence(s)

JAQQLQ020000001

UniProtKB/Swiss-Prot

Q5NVC5, Q5NVE6, Q5REX8

UniProtKB/TrEMBL

A0A2J8R7A8, A0A2J8R7B1

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Range

232794392..232807882

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_024254756.3 → XP_024110524.1 integrator complex subunit 11 isoform X1

Related

ENSPPYP00000002328.2

Conserved Domains (2) summary

COG1236
Location:4 → 444

YSH1; RNA processing exonuclease, beta-lactamase fold, Cft2 family [Translation, ribosomal structure and biogenesis]

cd16291
Location:6 → 204

INTS11-like_MBL-fold; Integrator complex subunit 11, and related proteins; MBL-fold metallo-hydrolase domain