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SUCLA2 succinate-CoA ligase ADP-forming subunit beta [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100171525, updated on 10-Oct-2024

Summary

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Gene symbol
SUCLA2
Gene description
succinate-CoA ligase ADP-forming subunit beta
Locus tag
CR201_G0016701
See related
Ensembl:ENSPPYG00000005352
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See SUCLA2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 14 NC_071999.2 (52844754..52999618, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 13 NC_071998.1 (35594514..35688268, complement)

Chromosome 14 - NC_071999.2Genomic Context describing neighboring genes Neighboring gene nucleosome assembly protein 1-like 1 Neighboring gene large ribosomal subunit protein uL15-like Neighboring gene uncharacterized LOC129049527 Neighboring gene nudix hydrolase 15 Neighboring gene mediator complex subunit 4 Neighboring gene DNA-directed RNA polymerases I, II, and III subunit RPABC4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp469H0232

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
Names
succinate-CoA ligase ADP-forming beta subunit
NP_001124678.1
XP_024113335.1
XP_024113336.2
XP_054384558.1
XP_063570704.1
XP_063570705.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131206.1 → NP_001124678.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial

    See identical proteins and their annotated locations for NP_001124678.1

    Status: PROVISIONAL

    Source sequence(s)
    CR860378
    UniProtKB/TrEMBL
    A0A2J8VSF4, A0A2J8VSJ1, A0A6D2WXE9, Q5R6V4
    Related
    ENSPPYP00000006097.1, ENSPPYT00000006336.2
    Conserved Domains (1) summary
    PRK00696
    Location:55 → 445
    sucC; succinyl-CoA synthetase subunit beta; Provisional

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071999.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    52844754..52999618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063714634.1 → XP_063570704.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1

  2. XM_063714635.1 → XP_063570705.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2J8VSF4, A0A6D2WXE9, Q5R6V4

  3. XM_054528583.2 → XP_054384558.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1

  4. XM_024257568.3 → XP_024113336.2  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1

  5. XM_024257567.3 → XP_024113335.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2J8VSF5
    Conserved Domains (1) summary
    cl25712
    Location:1 → 311
    SucC; Succinyl-CoA synthetase, beta subunit [Energy production and conversion]

RNA

  1. XR_010136636.1 RNA Sequence

  2. XR_010136637.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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