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CPM carboxypeptidase M [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100171502, updated on 26-Mar-2024

Summary

Gene symbol
CPM
Gene description
carboxypeptidase M
Locus tag
CR201_G0013999
See related
Ensembl:ENSPPYG00000004755
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See CPM in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (66857054..66937169, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (66859093..66938030, complement)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene SUZ domain-containing protein 1-like Neighboring gene MDM2 proto-oncogene Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC129049411 Neighboring gene cleavage and polyadenylation specific factor 6

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • DKFZp469F1221

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in peptide metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in protein processing IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
carboxypeptidase M
NP_001124659.1
XP_054382221.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131187.1NP_001124659.1  carboxypeptidase M precursor

    See identical proteins and their annotated locations for NP_001124659.1

    Status: PROVISIONAL

    Source sequence(s)
    CR857222
    UniProtKB/Swiss-Prot
    Q5RFD6
    UniProtKB/TrEMBL
    A0A2J8W153, H2NI03
    Related
    ENSPPYP00000005417.3, ENSPPYT00000005628.3
    Conserved Domains (2) summary
    cd03866
    Location:18310
    M14_CPM; Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup
    cd11308
    Location:314394
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    66857054..66937169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054526246.2XP_054382221.1  carboxypeptidase M isoform X1