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ERICH4 glutamate rich 4 [ Homo sapiens (human) ]

Gene ID: 100170765, updated on 17-Sep-2024

Summary

Official Symbol
ERICH4provided by HGNC
Official Full Name
glutamate rich 4provided by HGNC
Primary source
HGNC:HGNC:34497
See related
Ensembl:ENSG00000204978 AllianceGenome:HGNC:34497
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C19orf69
Expression
Biased expression in duodenum (RPKM 9.8), small intestine (RPKM 9.5) and 3 other tissues See more
Orthologs
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Genomic context

See ERICH4 in Genome Data Viewer
Location:
19q13.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (41443156..41444765)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (44264400..44266009)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (41949061..41950670)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10666 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10667 Neighboring gene VISTA enhancer hs1948 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 Neighboring gene distal membrane arm assembly component 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14682 Neighboring gene uncharacterized LOC107985329 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14683 Neighboring gene prostate cancer associated transcript 19

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130514.3NP_001123986.1  glutamate-rich protein 4

    See identical proteins and their annotated locations for NP_001123986.1

    Status: VALIDATED

    Source sequence(s)
    AC011526
    Consensus CDS
    CCDS46085.1
    UniProtKB/Swiss-Prot
    A6NGS2
    Related
    ENSP00000367429.2, ENST00000378187.3
    Conserved Domains (1) summary
    pfam15039
    Location:1111
    DUF4530; Domain of unknown function (DUF4530)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    41443156..41444765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017026119.2XP_016881608.1  glutamate-rich protein 4 isoform X1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    44264400..44266009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054319461.1XP_054175436.1  glutamate-rich protein 4 isoform X1