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sfl N-deacetylase and N-sulfotransferase sfl [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100169222, updated on 22-May-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
See related
EnsemblRapid:LOC100169222
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See sfl in Genome Data Viewer
Location:
chromosome: A1
Exon count:
16
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (21398780..21474575)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384168.1 (69124..144847, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100571233 Neighboring gene uncharacterized LOC100571136 Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene microRNA mir-3015a-2 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC115033674

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    21398780..21474575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003246549.4 → XP_003246597.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A8R2A7F3
    Related
    XP_003246597.1, XM_003246549.4
    Conserved Domains (2) summary
    pfam00685
    Location:600 → 849
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:27 → 511
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials