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LOC100169218 alpha-(1,6)-fucosyltransferase-like [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100169218, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100169218
Gene description
alpha-(1,6)-fucosyltransferase-like
See related
APHIDBASE:ACYPI009858; EnsemblRapid:LOC100169218
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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See LOC100169218 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (22239087..22244828, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384418.1 (155140..160994)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene decaprenyl-diphosphate synthase subunit 2 Neighboring gene alpha-(1,6)-fucosyltransferase Neighboring gene microRNA mir-3038 Neighboring gene uncharacterized LOC107884846

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->6)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    22239087..22244828 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029486812.1 → XP_029342672.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_029342672.1, XM_029486812.1
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  2. XM_016807798.2 → XP_016663287.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_016663287.1, XM_016807798.2
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  3. XM_016807797.2 → XP_016663286.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_016663286.1, XM_016807797.2
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  4. XM_029486811.1 → XP_029342671.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_029342671.1, XM_029486811.1
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  5. XM_029486808.1 → XP_029342668.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_029342668.1, XM_029486808.1
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  6. XM_029486807.1 → XP_029342667.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_029342667.1, XM_029486807.1
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  7. XM_029486810.1 → XP_029342670.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_029342670.1, XM_029486810.1
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]

  8. XM_008188979.3 → XP_008187201.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2JMY5
    Related
    XP_008187201.1, XM_008188979.3
    Conserved Domains (3) summary
    cd11300
    Location:151 → 475
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:482 → 534
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG1340
    Location:57 → 193
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
Nucleotide Protein
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