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LOC100168497 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100168497, updated on 18-Sep-2024

Summary

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Gene symbol
LOC100168497
Gene description
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
See related
APHIDBASE:ACYPI009192; EnsemblRapid:LOC100168497
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See LOC100168497 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
2
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A3 NC_042496.1 (2475768..2478048, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384243.1 (160907..163187, complement)

Chromosome A3 - NC_042496.1Genomic Context describing neighboring genes Neighboring gene UDP-glucose 4-epimerase-like Neighboring gene hydroxysteroid dehydrogenase-like protein 2 Neighboring gene uncharacterized LOC115034437 Neighboring gene hydroxysteroid dehydrogenase-like protein 2 Neighboring gene interleukin-1 receptor-associated kinase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
Names
asparagine-linked glycosylation protein 11 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042496.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    2475768..2478048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001948095.3 → XP_001948130.1  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

    UniProtKB/TrEMBL
    A0A8R1W491
    Related
    XP_001948130.1, XM_001948095.3
    Conserved Domains (1) summary
    cd03806
    Location:44 → 451
    GT4_ALG11-like; alpha-1,2-mannosyltransferase ALG11 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials