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PIG-V phosphatidylinositol glycan anchor biosynthesis class V [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100167190, updated on 15-May-2024

Summary

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Gene symbol
PIG-V
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
See related
APHIDBASE:ACYPI008003; EnsemblRapid:LOC100167190
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See PIG-V in Genome Data Viewer
Location:
chromosome: A1
Exon count:
3
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (152930855..152933041, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383492.1 (448348..450544, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene adaptor protein complex 2, subunit alpha Neighboring gene valacyclovir hydrolase Neighboring gene G-protein coupled receptor Mth Neighboring gene calumenin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    152930855..152933041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008191756.3 → XP_008189978.1  GPI mannosyltransferase 2

    See identical proteins and their annotated locations for XP_008189978.1

    UniProtKB/TrEMBL
    A0A8R1W0X2
    Related
    XP_008189978.1, XM_008191756.3
    Conserved Domains (1) summary
    cl21590
    Location:17 → 446
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_001947354.5 → XP_001947389.1  GPI mannosyltransferase 2

    See identical proteins and their annotated locations for XP_001947389.1

    UniProtKB/TrEMBL
    A0A8R1W0X2
    Related
    XP_001947389.1, XM_001947354.5
    Conserved Domains (1) summary
    cl21590
    Location:17 → 446
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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