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LOC100166593 alpha-(1,6)-fucosyltransferase-like [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100166593, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100166593
Gene description
alpha-(1,6)-fucosyltransferase-like
See related
APHIDBASE:ACYPI007452; EnsemblRapid:LOC100166593
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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See LOC100166593 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
10
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (5071626..5101332, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003385078.1 (11080..15703, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S12-like Neighboring gene mitochondrial ribosomal protein L2 Neighboring gene alpha-(1,6)-fucosyltransferase-like Neighboring gene alpha-(1,6)-fucosyltransferase-like Neighboring gene uncharacterized LOC100572017 Neighboring gene alpha-(1,6)-fucosyltransferase-like Neighboring gene alpha-(1,6)-fucosyltransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->6)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase-like
Names
alpha-(1,6)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    5071626..5101332 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029486546.1 → XP_029342406.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2NP43
    Related
    XP_029342406.1, XM_029486546.1
    Conserved Domains (3) summary
    cd11300
    Location:163 → 492
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:500 → 551
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    pfam12725
    Location:7 → 144
    DUF3810; Protein of unknown function (DUF3810)

  2. XM_029486545.1 → XP_029342405.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2NP43
    Related
    XP_029342405.1, XM_029486545.1

  3. XM_029486544.1 → XP_029342404.1  alpha-(1,6)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8R2NP43
    Related
    XP_029342404.1, XM_029486544.1
Nucleotide Protein
Heading Accession and Version

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