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LOC100165577 beta-1,3-glucosyltransferase [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100165577, updated on 10-May-2024

Summary

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Gene symbol
LOC100165577
Gene description
beta-1,3-glucosyltransferase
See related
APHIDBASE:ACYPI006513; EnsemblRapid:LOC100165577
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See LOC100165577 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
11
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A3 NC_042496.1 (15785347..15790260)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384362.1 (33743..38195, complement)

Chromosome A3 - NC_042496.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor Mth-like 1 Neighboring gene isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial Neighboring gene peroxisomal acyl-coenzyme A oxidase 3 Neighboring gene probable RNA helicase armi Neighboring gene Sys1 golgi trafficking protein Neighboring gene uncharacterized LOC115034427

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042496.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    15785347..15790260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001946952.5 → XP_001946987.1  beta-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A8R2AC23
    Related
    XP_001946987.1, XM_001946952.5
    Conserved Domains (1) summary
    cl21608
    Location:228 → 432
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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