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O-fut2 O-fucosyltransferase 2 [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100163639, updated on 10-May-2024

Summary

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Gene symbol
O-fut2
Gene description
O-fucosyltransferase 2
See related
APHIDBASE:ACYPI004711; EnsemblRapid:LOC100163639
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See O-fut2 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
7
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A2 NC_042495.1 (69595126..69598052, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383710.1 (435731..439153)

Chromosome A2 - NC_042495.1Genomic Context describing neighboring genes Neighboring gene glycerol kinase-like Neighboring gene cyclin-dependent kinase-like 1 Neighboring gene cyclin-dependent kinase-like 2 Neighboring gene metalloendopeptidase OMA1, mitochondrial Neighboring gene histone acetyltransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-fucosyltransferase 2; uncharacterized protein LOC100163639
Names
ACYPI004711

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246047.2 → NP_001232976.1  O-fucosyltransferase 2 precursor

    See identical proteins and their annotated locations for NP_001232976.1

    Status: PROVISIONAL

    Source sequence(s)
    AK342404
    UniProtKB/TrEMBL
    C4WX22, J9JWE9
    Related
    NP_001232976.1, NM_001246047.2
    Conserved Domains (2) summary
    cd11298
    Location:49 → 387
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
    pfam10250
    Location:59 → 380
    O-FucT; GDP-fucose protein O-fucosyltransferase

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042495.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    69595126..69598052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029488909.1 → XP_029344769.1  uncharacterized protein LOC100163639 isoform X1

    UniProtKB/TrEMBL
    A0A8R2JR85
    Related
    XP_029344769.1, XM_029488909.1
    Conserved Domains (1) summary
    cd11298
    Location:49 → 386
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein Strain
Heading Accession and Version

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