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LOC100163054 alpha-(1,6)-fucosyltransferase [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100163054, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100163054
Gene description
alpha-(1,6)-fucosyltransferase
See related
APHIDBASE:ACYPI004166; EnsemblRapid:LOC100163054
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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See LOC100163054 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
10
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (135276962..135283152)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383723.1 (7..6021, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene epidermal retinal dehydrogenase 2-like Neighboring gene protein sax-3 Neighboring gene collagen alpha-1(XVIII) chain Neighboring gene uncharacterized LOC115033863 Neighboring gene transfer RNA phenylalanine (anticodon GAA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein 6-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    135276962..135283152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008184038.3 → XP_008182260.1  alpha-(1,6)-fucosyltransferase

    See identical proteins and their annotated locations for XP_008182260.1

    UniProtKB/TrEMBL
    X1XL71
    Related
    XP_008182260.1, XM_008184038.3
    Conserved Domains (2) summary
    cd11300
    Location:159 → 481
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:489 → 542
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)

  2. XM_001947060.5 → XP_001947095.2  alpha-(1,6)-fucosyltransferase

    See identical proteins and their annotated locations for XP_001947095.2

    UniProtKB/TrEMBL
    X1XL71
    Related
    XP_001947095.2, XM_001947060.5
    Conserved Domains (2) summary
    cd11300
    Location:159 → 481
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:489 → 542
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
Nucleotide Protein Strain
Heading Accession and Version

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