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LOC100161584 uncharacterized LOC100161584 [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100161584, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100161584
Gene description
uncharacterized LOC100161584
See related
APHIDBASE:ACYPI002796; EnsemblRapid:LOC100161584
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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See LOC100161584 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
9
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A2 NC_042495.1 (23013254..23029160)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383788.1 (136527..152456)

Chromosome A2 - NC_042495.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107884628 Neighboring gene proteasome inhibitor PI31 subunit-like Neighboring gene pre-mRNA-splicing factor SYF2-like Neighboring gene uncharacterized LOC100165690 Neighboring gene proteasome inhibitor PI31 subunit-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100161584

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042495.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    23013254..23029160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029489769.1 → XP_029345629.1  uncharacterized protein LOC100161584 isoform X3

    UniProtKB/TrEMBL
    A0A8R2JSH6
    Related
    XP_029345629.1, XM_029489769.1
    Conserved Domains (3) summary
    smart00547
    Location:378 → 399
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:12 → 53
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:378 → 397
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_029489768.1 → XP_029345628.1  uncharacterized protein LOC100161584 isoform X1

    UniProtKB/TrEMBL
    A0A8R2JRT8
    Related
    XP_029345628.1, XM_029489768.1

  3. XM_003244542.4 → XP_003244590.1  uncharacterized protein LOC100161584 isoform X2

    UniProtKB/TrEMBL
    A0A8R1W8U9
    Related
    XP_003244590.1, XM_003244542.4
    Conserved Domains (3) summary
    smart00547
    Location:378 → 399
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:12 → 53
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:378 → 397
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  4. XM_016804411.2 → XP_016659900.1  uncharacterized protein LOC100161584 isoform X4

    UniProtKB/TrEMBL
    A0A8R2D414
    Related
    XP_016659900.1, XM_016804411.2
    Conserved Domains (3) summary
    smart00547
    Location:378 → 399
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:12 → 53
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:378 → 397
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  5. XM_029489770.1 → XP_029345630.1  uncharacterized protein LOC100161584 isoform X5

    UniProtKB/TrEMBL
    A0A8R2JT61
    Related
    XP_029345630.1, XM_029489770.1

RNA

  1. XR_510735.3 RNA Sequence

    Related
    XR_510735.3

  2. XR_001679506.2 RNA Sequence

    Related
    XR_001679506.2
Nucleotide Protein
Heading Accession and Version

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