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LOC100160830 fringe glycosyltransferase [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100160830, updated on 10-May-2024

Summary

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Gene symbol
LOC100160830
Gene description
fringe glycosyltransferase
See related
APHIDBASE:ACYPI002099; EnsemblRapid:LOC100160830
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See LOC100160830 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
11
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (64824659..64841755)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383787.1 (352785..369886)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene methyltransferase-like protein 22 Neighboring gene protein disulfide-isomerase Neighboring gene uncharacterized LOC100571486 Neighboring gene mpv17-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fringe glycosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    64824659..64841755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001949623.4 → XP_001949658.2  fringe glycosyltransferase

    UniProtKB/TrEMBL
    A0A8R1W2P4
    Related
    XP_001949658.2, XM_001949623.4
    Conserved Domains (1) summary
    pfam02434
    Location:74 → 314
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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Research Materials