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LOC100160697 probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100160697, updated on 10-May-2024

Summary

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Gene symbol
LOC100160697
Gene description
probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
See related
APHIDBASE:ACYPI001976; EnsemblRapid:LOC100160697
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See LOC100160697 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) X NC_042493.1 (56646577..56650930)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383506.1 (1301235..1305571, complement)

Chromosome X - NC_042493.1Genomic Context describing neighboring genes Neighboring gene Molybdenum cofactor synthesis 1 Neighboring gene sorting nexin-14 Neighboring gene uncharacterized LOC100573936 Neighboring gene uncharacterized LOC107884503 Neighboring gene uncharacterized LOC100573855

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042493.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    56646577..56650930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001952020.5 → XP_001952055.2  probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    UniProtKB/TrEMBL
    A0A8R1W385
    Related
    XP_001952055.2, XM_001952020.5
    Conserved Domains (1) summary
    cl21590
    Location:4 → 344
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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