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LOC100159124 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100159124, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100159124
Gene description
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase
See related
APHIDBASE:ACYPI000523; EnsemblRapid:LOC100159124
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) Unplaced Scaffold NW_021759352.1 (16..4059)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003397295.1 (16..3979)

NW_021759352.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NW_021759352.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    16..4059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001944537.4 → XP_001944572.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A8R1VZ63
    Related
    XP_001944572.2, XM_001944537.4
    Conserved Domains (2) summary
    pfam12062
    Location:1 → 177
    HSNSD; heparan sulfate-N-deacetylase
    cl21551
    Location:266 → 404
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials